Description
Data Records
The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 19 records.
2 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versions
The table below shows only published versions of the resource that are publicly accessible.
How to cite
Researchers should cite this work as follows:
Pavloudi C, Stavroulaki M, Santi I (2026). Microbiome eDNA preservation study using sediment samples from Crete (16S rRNA). Version 1.3. Hellenic Center for Marine Research. Samplingevent dataset. https://ipt.medobis.eu/resource?r=edna&v=1.3
Rights
Researchers should respect the following rights statement:
The publisher and rights holder of this work is Hellenic Center for Marine Research. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF Registration
This resource has not been registered with GBIF
Keywords
Bacteria; Eukaryota; 16S rRNA; 18S rRNA; preservative; DESS; DNA/RNA shield; seawater; sediment; Other
External data
The resource data is also available in other formats
| Best Practices to preserve marine samples microbiome community prior DNA extraction | https://www.ebi.ac.uk/ena/browser/view/PRJEB108325 ASCII Fastq |
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Contacts
- Metadata Provider ●
- Originator ●
- Point Of Contact
- Data scientist
https://orcid.org/0000-0001-5106-6067
- Originator
- Research fellow at IMBBC, National Communication Officer for EMBRC Operational, Contact for EMO BON (GR)
- Originator ●
- Point Of Contact
- Observation, Data and Service Development Officer
Geographic Coverage
South West [35.334891 N, 25.278761 E], North East [35.346621 N, 25.282741 E]
| Bounding Coordinates | South West [35.333, 25.253], North East [35.347, 25.3] |
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Taxonomic Coverage
Bacteria, Eukaryota
| Kingdom | Bacteria, Eukaryota |
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Temporal Coverage
| Start Date | 2021-03-29 |
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Project Data
The core mission of the DTO-BioFlow Project is to unlock those “sleeping” biodiversity data enabling the sustained flow of these and new data via primary integrators and EMODnet into the EU Digital Twin Ocean. It will create a digital replica of marine biological processes transforming new and existing data flows into evidence-based knowledge. The project aligns with the EU's Biodiversity Strategy and Nature Restoration Law and with the mission "Restore our oceans and waters by 2030", both of which advocate for the protection and restoration of land and sea regions.
| Title | DTO-BioFlow: Integration of biodiversity monitoring data into the Digital Twin Ocean |
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| Identifier | Subsidy agreement ID 101112823 |
| Funding | This work used resources provided by the European Marine Omics Biodiversity Observation Network (EMO BON) project, coordinated by the European Marine Biological Resource Centre - European Research Infrastructure Consortium (EMBRC-ERIC). |
| Study Area Description | Samples were collected at the EMO BON observatory HCMR-1 (Aegean Sea, Greece). |
The personnel involved in the project:
Additional Metadata
| Alternative Identifiers | https://ipt.medobis.eu/resource?r=edna |
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