Microbiome eDNA preservation study using sediment samples from Crete (16S rRNA)

Sampling event
最新版本 published by Hellenic Center for Marine Research on 7月 9, 2026 Hellenic Center for Marine Research
發布日期:
2026年7月9日
授權條款:
CC-BY 4.0

下載最新版本的 Darwin Core Archive (DwC-A) 資源，或資源詮釋資料的 EML 或 RTF 文字檔。

DwC-A資料集 下載 19 紀錄 在 English 中 (4 MB) - 更新頻率: 無計畫更新
元數據EML檔 下載 在 English 中 (13 KB)
元數據RTF文字檔 下載 在 English 中 (9 KB)

說明

Comparison of the impact of different preservatives and storage conditions in the marine microbial communities (sediment). -This dataset is part of the same Microbiome eDNA preservation study for 16S rRNA and 18S rRNA.Links for each dataset of the project-> eDNA 16S water: https://ipt.medobis.eu/resource?r=edna-16s-water, eDNA 16S sediment: https://ipt.medobis.eu/resource?r=edna, eDNA 18S water:https://ipt.medobis.eu/resource?r=edna-18s-water, eDNA 18S sediment:https://ipt.medobis.eu/resource?r=edna-18s-sediment -

資料紀錄

此資源sampling event的資料已發佈為達爾文核心集檔案（DwC-A），其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 19 筆紀錄。

亦存在 2 筆延伸集的資料表。延伸集中的紀錄補充核心集中紀錄的額外資訊。 每個延伸集資料表中資料筆數顯示如下。

Event (核心)
19
dnaDerivedData 
73387
Occurrence 
73387

此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本，以便利追蹤其隨時間的變更。

版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

Pavloudi C, Stavroulaki M, Santi I (2026). Microbiome eDNA preservation study using sediment samples from Crete (16S rRNA). Version 1.3. Hellenic Center for Marine Research. Samplingevent dataset. https://ipt.medobis.eu/resource?r=edna&v=1.3

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 Hellenic Center for Marine Research。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源尚未向GBIF註冊

關鍵字

Bacteria; Eukaryota; 16S rRNA; 18S rRNA; preservative; DESS; DNA/RNA shield; seawater; sediment; Other

外部資料

此資源尚有其他格式可用

Best Practices to preserve marine samples microbiome community prior DNA extraction https://www.ebi.ac.uk/ena/browser/view/PRJEB108325 ASCII Fastq

聯絡資訊

Christina Pavloudi
  • 元數據提供者 ●
  • 出處 ●
  • 連絡人
  • Data scientist
European Marine Biological Resource Centre (EMBRC-ERIC)
FR
Melanthia Stavroulaki
  • 出處
  • Research fellow at IMBBC, National Communication Officer for EMBRC Operational, Contact for EMO BON (GR)
HCMR-IMBBC
GR
Ioulia Santi
  • 出處 ●
  • 連絡人
  • Observation, Data and Service Development Officer
European Marine Biological Resource Centre (EMBRC-ERIC)
GR
Melina Loulakaki
  • 典藏經理
  • Computer scientist
HCMR-IMBBC
GR

地理涵蓋範圍

South West [35.334891 N, 25.278761 E], North East [35.346621 N, 25.282741 E]

界定座標範圍 緯度南界 經度西界 [35.333, 25.253], 緯度北界 經度東界 [35.347, 25.3]

分類群涵蓋範圍

Bacteria, Eukaryota

Kingdom Bacteria, Eukaryota

時間涵蓋範圍

起始日期 2021-03-29

計畫資料

The core mission of the DTO-BioFlow Project is to unlock those “sleeping” biodiversity data enabling the sustained flow of these and new data via primary integrators and EMODnet into the EU Digital Twin Ocean. It will create a digital replica of marine biological processes transforming new and existing data flows into evidence-based knowledge. The project aligns with the EU's Biodiversity Strategy and Nature Restoration Law and with the mission "Restore our oceans and waters by 2030", both of which advocate for the protection and restoration of land and sea regions.

計畫名稱 DTO-BioFlow: Integration of biodiversity monitoring data into the Digital Twin Ocean
辨識碼 Subsidy agreement ID 101112823
經費來源 This work used resources provided by the European Marine Omics Biodiversity Observation Network (EMO BON) project, coordinated by the European Marine Biological Resource Centre - European Research Infrastructure Consortium (EMBRC-ERIC).
研究區域描述 Samples were collected at the EMO BON observatory HCMR-1 (Aegean Sea, Greece).

參與計畫的人員:

Christina Pavloudi

額外的詮釋資料