Micro-CT Morphological Data of Glycera tridactyla Schmarda, 1861 and Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942) species

Sampling event
Latest version published by Hellenic Center for Marine Research on Feb 13, 2026 Hellenic Center for Marine Research

Download the latest version of this resource data as a Darwin Core Archive (DwC-A) or the resource metadata as EML or RTF:

Data as a DwC-A file download 78 records in English (12 KB) - Update frequency: unknown
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Metadata as an RTF file download in English (11 KB)

Description

This dataset comprises morphological data for two annelid species, the polychaete Glycera tridactyla Schmarda, 1861, and the sipunculan Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942), obtained using micro-computed tomography (micro-CT). Several parameters related to the eversion mechanism of the pharynx in Polychaeta and the introvert in Sipuncula were estimated through two- and three-dimensional analyses of micro-CT datasets from specimens in different body configurations.

Data Records

The data in this sampling event resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 78 records.

2 extension data tables also exist. An extension record supplies extra information about a core record. The number of records in each extension data table is illustrated below.

Event (core)
78
ExtendedMeasurementOrFact 
324
Occurrence 
29

This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.

Versions

The table below shows only published versions of the resource that are publicly accessible.

How to cite

Researchers should cite this work as follows:

Keklikoglou K, Vernadou E, Mavraki D, Chatzinikolaou E, Langeneck J, Musco L (2026). Micro-CT Morphological Data of Glycera tridactyla Schmarda, 1861 and Phascolosoma (Phascolosoma) stephensoni (Stephen, 1942) species. Version 1.0. Hellenic Center for Marine Research.

Rights

Researchers should respect the following rights statement:

The publisher and rights holder of this work is Hellenic Center for Marine Research. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF Registration

This resource has been registered with GBIF, and assigned the following GBIF UUID: 22fa3c39-2ff0-4f78-826f-bf526df17354.  Hellenic Center for Marine Research publishes this resource, and is itself registered in GBIF as a data publisher endorsed by Ocean Biodiversity Information System.

Keywords

Samplingevent; Specimen; Polychaeta; Sipuncula; 3D analysis; eversion mechanism; introvert; pharynx

Contacts

Kleoniki Keklikoglou
  • Metadata Provider
  • Originator
  • Point Of Contact
Research fellow
Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR)
Gournes Pediados
71500 Heraklion
Crete
GR
Emmanouela Vernadou
  • Originator
Research Technician (MSc)
Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR)
Gournes Pediados
71500 Heraklion
Crete
GR
Dimitra Mavraki
  • Custodian Steward
  • Originator
Data manager
Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research
Thalassocosmos, Former American Base
71003 Heraklion
Crete
GR
Eva Chatzinikolaou
  • Originator
Research fellow
Institute of Marine Biology, Biotechnology and Aquaculture - Hellenic Centre for Marine Research (IMBBC-HCMR)
Gournes Pediados
71500 Heraklion
Crete
GR
Joachim Langeneck
  • Originator
Research fellow
National Interuniversity Consortium for Marine Sciences (CoNISMa)
University of Salento, Campus Ecotekne, strada provinciale Lecce-Monteroni
00196 Lecce
IT
Luigi Musco
  • Originator
Research fellow
National Interuniversity Consortium for Marine Sciences (CoNISMa)
University of Salento, Campus Ecotekne, strada provinciale Lecce-Monteroni
00196 Lecce
IT
Ioannis Rallis
  • Custodian Steward
Data manager, Marine Biologist
Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research
Heraklion
GR

Geographic Coverage

Sampling took place in two different areas located in the Gulf of Taranto, Ionian Sea

Bounding Coordinates South West [40.24, 17.37], North East [40.35, 17.91]

Taxonomic Coverage

No Description available

Species Phascolosoma (Phascolosoma) stephensoni (Peanut worm), Glycera tridactyla (Bloodworm)

Temporal Coverage

Start Date 2022-10-12
Start Date 2023-06-14
Start Date 2024-03-21
Start Date 2024-04-02

Project Data

Traditionally, robots are machines controlled by a central unit to perform predefined tasks in structured environments. MAPWORMS challenges this view by developing robots inspired by simplified marine annelids that respond to environmental stimuli and adapt through shape-morphing. These robots are built using smart shape-memory hydrogels that react to factors such as chemicals, ions, light, and pH. By combining responsive and non-responsive materials, actuation units are designed to translate stiffness changes into shape transformations. This approach integrates biological inspiration, materials science, mathematical modeling, and robotics to create adaptive machines and functional actuators.

Title Mimicking Adaptation and Plasticity in WORMS (MAPWORMS)
Identifier https://www.mapworms.eu/
Funding MAPWORMS has received funding from the European Union’s Horizon Europe research and innovation programme under grant agreement No 101046846
Study Area Description Mediterranean Sea
Design Description "MAPWORMS intends to: 1) study adaptation and plasticity of the body plan in Marine Annelida and shed light on the specialization process that allowed forms appeared early in the evolution of the Phylum to adapt to different environments; 2) develop a mathematical model of Annelida plasticity and adaptation to the environment through burrowing, protrusion of parts of their bodies, and morphological changes; 3) develop smart soft materials embodying responsivity, shape morphing and self-healing capabilities, and based on DNA components; 4) develop bio-inspired modular shape morphing robots across the scale. and provides samples to WPs 3-6, each one assigned one analytical approach for the assessment of response of target organisms to experimental treatment."

Sampling Methods

Individuals of P. stephensoni were sampled on hard bottoms at Marina di Pulsano, while individuals of G. tridactyla were sampled on soft bottoms in the semi-enclosed Strea inlet, Porto Cesareo.

Study Extent Samples for micro-CT imaging were collected between the tide level and 0.5 m depth with hammer and chisel (P. stephensoni) or using a shovel and a sieve with 1 mm mesh (G. tridactyla).

Method step description:

  1. WoRMS Taxon Match Tool – Verify scientific names. (www.marinespecies.org/aphia.php?p=match) OBIS Map Tool – Validate coordinates and estimate uncertainty. (obis.org/maptool/) NERC Vocabulary Server (NVS) – Assign standardized terms with IDs. (vocab.nerc.ac.uk/) LifeWatch & EMODnet QC Tool – Cross-check dataset quality. (rshiny.lifewatch.be/BioCheck/)

Additional Metadata

Alternative Identifiers 10.25607/mqd09f
22fa3c39-2ff0-4f78-826f-bf526df17354
https://ipt.medobis.eu/resource?r=micro-ct_morphological_data_glycera-tridactyla-phascolosoma-stephensoni